Biological Physics I - Methods and Models

Presentations

• Organelle packing interactions in yeast revealed by high-resolution, isotropic soft X-ray tomography and 3D morphometric modeling

  ORAL

  March 18, 2025, 5:30 PM – March 18, 2025, 5:42 PM

  Presenters

  • Mary Mirvis

    University of California, San Francisco

  Authors

  • Mary Mirvis

    University of California, San Francisco

  • Jianhua Chen

    National Center for X-Ray Tomography, LBL; Dept of Anatomy, UCSF

  • Axel Ekman

    National Center for X-Ray Tomography, LBL; Dept. of Anatomy, UCSF

  • Wallace F Marshall

    UCSF

  • Carolyn Larabell

    National Center for X-ray Tomography, LBL; Dept. of Anatomy, UCSF

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• Abstract Withdrawn

  COFFEE_KLATCH Withdrawn

  March 18, 2025, 5:42 PM – March 18, 2025, 5:54 PM

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• Biological physics in the life-sciences curriculum

  ORAL

  March 18, 2025, 5:54 PM – March 18, 2025, 6:06 PM

  Presenters

  • Peter H Nelson

    Fisk University

  Authors

  • Peter H Nelson

    Fisk University

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• Inference of Transcriptional Regulation From STARR-seq Data

  ORAL

  March 18, 2025, 6:06 PM – March 18, 2025, 6:18 PM

  Publication: Safaeesirat A, Taeb H, Tekoglu E, Morova T, Lack N, Emberly E. Inference of Transcriptional Regulation From STARR-seq Data. bioRxiv. 2024:2024-03.

  Presenters

  • Amin Safaeesirat

    Simon Fraser University

  Authors

  • Amin Safaeesirat

    Simon Fraser University

  • Hoda Taeb

    Simon Fraser University

  • Tahsin Emirhan Tekoğlu

    Koç University

  • Tunc Morova

    Vancouver Prostate Centre

  • Nathan A Lack

    Koç University

  • Eldon Emberly

    Simon Fraser University

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• Searching the human genome for both germline and somatic variant DNA using an updated version of our GPScanner, unlimited by restrictions in reading frame or direction.

  ORAL

  March 18, 2025, 6:18 PM – March 18, 2025, 6:30 PM

  Presenters

  • Robert J Goshen

    Goshen & Papernick Incorporated

  Authors

  • Robert J Goshen

    Goshen & Papernick Incorporated

  • Harriet D Papernick

    Goshen & Papernick Incorporated

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• Abstract Withdrawn

  ORAL Withdrawn

  March 18, 2025, 6:30 PM – March 18, 2025, 6:42 PM

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• Emergent spatiotemporal organization in the endosomal network: Quantitative analysis via lattice light-sheet microscopy

  ORAL

  March 18, 2025, 6:42 PM – March 18, 2025, 6:54 PM

  Publication: York H, Joshi K, wright C, et al (2023) Deterministic early endosomal maturations emerge from a stochastic trigger-and-convert mechanism. Nat Commun 14:4652.

  Presenters

  • Charles Wright

    Monash University

  Authors

  • Charles Wright

    Monash University

  • Harrison York

    Monash University

  • Kunaal Joshi

    Arizona State University, Purdue University

  • Srividya Iyer-Biswas

    Purdue University, Unaffiliated

  • Senthil Arumugam

    Monash University

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• Abstract Withdrawn

  ORAL Withdrawn

  March 18, 2025, 6:54 PM – March 18, 2025, 7:06 PM

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• Architectural underpinnings of stochastic intergenerational homeostasis

  ORAL

  March 18, 2025, 7:06 PM – March 18, 2025, 7:18 PM

  Presenters

  • Kunaal Joshi

    Arizona State University, Purdue University

  Authors

  • Kunaal Joshi

    Arizona State University, Purdue University

  • Charles S Wright

    Monash University

  • Rudro Biswas

    Unaffiliated

  • Srividya Iyer-Biswas

    Purdue University, Unaffiliated

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• Replicator Dynamics with Higher Order Interactions and Hyper-Graphs

  ORAL

  March 18, 2025, 7:18 PM – March 18, 2025, 7:30 PM

  Presenters

  • Christopher Griffin

    Pennsylvania State University

  Authors

  • Christopher Griffin

    Pennsylvania State University

  • Shen Zhang

    Qiuzhen College, Tsinghua University

  • Shing-Tung Yau

    Qiuzhen College, Tsinghua University & Beijing Institute of Mathematical Sciences and Applications & Yau Mathematical Sciences Center, Tsinghua University

  • Rongling Wu

    Beijing Institute of Mathematical Sciences and Applications

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