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Quantum physics of living things: excitonic dynamics on the DNA strand and its possible impact on epigenetic phenomena

POSTER

Abstract

Epigenetic modifications serve as a bridge between DNA sequences and responses to external stimuli, playing a key role in human physiology and disease development. However, unlike quantum phenomena such as proton tunneling, which are known to influence mutation mechanisms, the role of quantum physics in epigenetics remains largely unexplored. In this study, we focus on photoexcited energy and charge transfer processes in biologically relevant systems, merging insights from biology, chemistry, and physics. Extensive research has been conducted on photoexcited charge dynamics in DNA due to their role in causing lesions, altering DNA binding, and triggering carcinogenic mutations. We adopt a mesoscopic approach, utilizing existing literature to create a tight-binding model that accurately captures essential aspects of correlated quantum charge dynamics. Our model is designed for efficiency, enabling large-scale studies on DNA double strands. We particularly analyze the average excitonic lifetime and coherence length generated by external sources across 16,384 DNA sequences of length 7 (14 bases in total), providing a benchmark for quantum effects. Our results align with experimental data and offer a detailed characterization of sequence correlations within the studied ensemble.

The authors appreciate the financial support of the Center for Integrated Quantum Science and Technology (IQST) and the BMBF through the QCOMP project in Cluster4Future QSens.

Publication: Siebert R., Ammerpohl O., Rossini M. et al. A quantum physics layer of epigenetics: a hypothesis deduced from charge transfer and chirality-induced spin selectivity of DNA. Clin Epigenet 15, 145 (2023). https://doi.org/10.1186/s13148-023-01560-3<br><br>D. Herb, M. Rossini, J. Ankerhold. Ultrafast excitonic dynamics in DNA: Bridging correlated quantum dynamics and sequence dependence. Physical Review E 109 (6), 064413 (2024)<br><br>M. Rossini, O. Ammerpohl, R. Siebert, J. Ankerhold. Effect of environmental noise on charge diffusion in DNA: Towards modeling its potential epigenetic impact in live processes. arXiv preprint arXiv:2407.14252 (2024)

Presenters

  • Mirko Rossini

    Ulm University

Authors

  • Mirko Rossini

    Ulm University

  • Joachim Ankerhold

    University Ulm, Institute for Complex Quantum Systems, Ulm University

  • Dennis Herb

    Ulm University

  • Reiner Siebert

    Ulm University

  • Ole Ammerpohl

    Ulm University

  • Constantinos Simserides

    National and Kapodistrian University of Athens

  • Rosa DiFelice

    University of Southern California, CNR Institute of Nanoscience, University of Southern California