Complex Networks: Biology to Machines

Presentations

• Deep Learning and Statistical longitudinal medication studies of attention-deficit/hyperactivity disorder of (ADHD) participants

  ORAL

  March 18, 2025, 2:30 PM – March 18, 2025, 2:42 PM

  Publication: none yet

  Presenters

  • Chaundy Lee McKeever

    Indiana University Bloomington

  Authors

  • Jorge V Jose

    Indiana University Bloomington

  • Khoshrav Doctor

    Indiana University Bloomington

  • Chaundy Lee McKeever

    Indiana University Bloomington

  View abstract →

• A cell-level protein aggregation model reveals the main molecular mechanisms in neurodegenerative diseases

  ORAL

  March 18, 2025, 2:42 PM – March 18, 2025, 2:54 PM

  Publication: "A cell-level protein aggregation model to predict neurodegenerative disease phenomena" in preparation<br>"Quantifying the rates of cell-autonomous and cell-to-cell tau aggregation in PSP" in preparation<br>

  Presenters

  • Shih-Huan Huang

    Department of Chemistry, University of Cambridge

  Authors

  • Shih-Huan Huang

    Department of Chemistry, University of Cambridge

  • Georg Meisl

    Department of Chemistry, University of Cambridge

  • Tanrada Pansuwan

    Department of Clinical Neuroscience, University of Cambridge

  • Annelies Quaegebeur

    Department of Clinical Neuroscience, University of Cambridge

  • Timothy Rittman

    Department of Clinical Neuroscience, University of Cambridge

  • Tuomas Knowles

    Department of Chemistry, University of Cambridge

  • James B Rowe

    Department of Clinical Neuroscience, University of Cambridge, Department of Clinical Neuroscience, Univesity of Cambridge

  • David Klenerman

    Department of Chemistry, University of Cambridge

  View abstract →

• Neural gain amplification and mode-mixing lead to cortico-hippocampal state-transitions

  ORAL

  March 18, 2025, 2:54 PM – March 18, 2025, 3:06 PM

  Presenters

  • Richa Phogat

    The University of Newcastle, University of Newcastle

  Authors

  • Richa Phogat

    The University of Newcastle, University of Newcastle

  • Anna Behler

    The University of Newcastle, The University of Newcastle, Australia

  • Saurabh Sonkusare

    The University of Newcastle, The University of Newcastle, Australia

  • James Pang

    Monash University, Australia

  • Nikitas Koussis

    The University of Newcastle, Australia

  • James Roberts

    QIMR Berghofer Medical Research Institute, Australia

  • Jordan DeKraker

    McGill University, Canada

  • Alex Fornito

    Monash University, Australia

  • Peter Alexander Robinson

    University of Sydney

  • Michael Breakspear

    The University of Newcastle, Australia

  View abstract →

• bioRNNS: toward more biologically plausible neural network models of brain dynamics

  ORAL

  March 18, 2025, 3:06 PM – March 18, 2025, 3:18 PM

  Presenters

  • Ahmad Beyh

    Rutgers University

  Authors

  • Ahmad Beyh

    Rutgers University

  • Jason Z Kim

    Cornell University

  • Linden Parkes

    Rutgers University

  View abstract →

• Inferring minimax entropy models from neural responses to natural movies

  ORAL

  March 18, 2025, 3:18 PM – March 18, 2025, 3:30 PM

  Presenters

  • Eliza Z Blodget

    University of Chicago

  Authors

  • Eliza Z Blodget

    University of Chicago

  • Christopher W Lynn

    Yale University

  • Stephanie E Palmer

    University of Chicago

  View abstract →

• Inferring biological processes with intrinsic noise from cross-sectional data

  ORAL

  March 18, 2025, 3:30 PM – March 18, 2025, 3:42 PM

  Publication: https://arxiv.org/html/2410.07501v1

  Presenters

  • Suryanarayana Maddu

    Flatiron Institute

  Authors

  • Suryanarayana Maddu

    Flatiron Institute

  • Victor Chardès

    Flatiron Institute

  • Michael J Shelley

    Flatiron Institute (Simons Foundation)

  View abstract →

• Abstract Withdrawn

  ORAL Withdrawn

  March 18, 2025, 3:42 PM – March 18, 2025, 3:54 PM

  View abstract →

• Coarse-graining, scale invariance, and emergence of summarization in narratives

  ORAL

  March 18, 2025, 3:54 PM – March 18, 2025, 4:06 PM

  Presenters

  • Weishun Zhong

    Institute for Advanced Study

  Authors

  • Weishun Zhong

    Institute for Advanced Study

  • Tankut Can

    Emory University and Institue for Advanced Study

  • Mikhail Katkov

    Weizmann Institute of Science and Institute for Advanced Study

  • Ilya Shnayderman

    Weizmann Institute of Science

  • Antonios Georgiou

    Institute for Advanced Study

  • Misha Tsodyks

    Weizmann Institute of Science and Institute for Advanced Study

  View abstract →

• A biocomputing paradigm for zero-shot adaptation and learning in neural networks

  ORAL

  March 18, 2025, 4:06 PM – March 18, 2025, 4:18 PM

  Presenters

  • Wolfgang Losert

    University of Maryland College Park

  Authors

  • Wolfgang Losert

    University of Maryland College Park

  • Hoony Kang

    University of Maryland, College Park

  View abstract →

• Phase Space Engineering of Digital Memcomputing Machines

  ORAL

  March 18, 2025, 4:18 PM – March 18, 2025, 4:30 PM

  Publication: C. Sipling, Y.-H. Zhang, M. Di Ventra. Phase Space Engineering of Digital Memcomputing Machines. In preparation.

  Presenters

  • Chesson Sipling

    University of California, San Diego

  Authors

  • Chesson Sipling

    University of California, San Diego

  • Yuan-Hang Zhang

    University of California, San Diego

  • Massimiliano Di Ventra

    University of California, San Diego

  View abstract →

• Out-of-equilibrium molecular computing for efficient solutions to NP-hard graph problems

  ORAL

  March 18, 2025, 4:30 PM – March 18, 2025, 4:42 PM

  Presenters

  • Qian-Ze Zhu

    Harvard University

  Authors

  • Qian-Ze Zhu

    Harvard University

  • Francesco Mottes

    Harvard University

  • Erin Crawley

    Harvard University

  • Michael P Brenner

    Harvard University, Harvard University/Google Research

  View abstract →

• Random matrix theory-guided denoising of single-cell RNA-seq data

  ORAL

  March 18, 2025, 4:42 PM – March 18, 2025, 4:54 PM

  Presenters

  • Victor Chardès

    Flatiron Institute

  Authors

  • Victor Chardès

    Flatiron Institute

  View abstract →

• Phase chimera states: frozen patterns of disorder

  ORAL

  March 18, 2025, 4:54 PM – March 18, 2025, 5:06 PM

  Publication: Phase chimera states: frozen patterns of disorder<br>ER Zajdela, DM Abrams - arXiv preprint arXiv:2308.06190, 2023

  Presenters

  • Emma Rosa Zajdela

    Princeton University

  Authors

  • Emma Rosa Zajdela

    Princeton University

  • Daniel M Abrams

    Northwestern University

  View abstract →

• Bulk-Boundary Correspondence in Ergodic and Nonergodic One-Dimensional Stochastic Processe

  ORAL

  March 18, 2025, 5:06 PM – March 18, 2025, 5:18 PM

  Publication: Taro Sawada, Kazuki Sone, Kazuki Yokomizo, Yuto Ashida, Takahiro Sagawa, arXiv:2405.00458

  Presenters

  • Taro Sawada

    Univ of Tokyo

  Authors

  • Taro Sawada

    Univ of Tokyo

  • Kazuki Sone

    Univ of Tsukuba

  • Kazuki Yokomizo

    Univ of Tokyo

  • Yuto Ashida

    Univ of Tokyo

  • Takahiro Sagawa

    Univ of Tokyo, University of Tokyo, The University of Tokyo, Department of Applied Physics, The University of Tokyo

  View abstract →

• Mechanical diffusion models

  ORAL

  March 18, 2025, 5:18 PM – March 18, 2025, 5:30 PM

  Presenters

  • Cyrill Bösch

    Princeton University

  Authors

  • Cyrill Bösch

    Princeton University

  • Geoffrey Roeder

    Princeton University

  • Marc Serra-Garcia

    AMOLF

  • Ryan P Adams

    Princeton University

  View abstract →