Learning active particle dynamics and hydrodynamics from experimental data
ORAL · Invited
Abstract
Recent advances in live-imaging techniques enable accurate tracking of self-propelled colloids, swimming microorganisms, and other active particle systems across a wide range of length and time scales. This remarkable experimental progress presents an opportunity to infer quantitative models of complex particle-particle interactions and emergent collective dynamics directly from video microscopy data. In this talk, I will summarize our recent efforts to integrate spectral methods with deterministic and stochastic inference schemes to identify predictive ODE, SDE, and PDE models for various active matter systems. By focusing on examples from recent microfluidics (and other) experiments, we illustrate the promise of such approaches for simultaneously measuring multiple system parameters that may otherwise be difficult to access experimentally.
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Publication: Discovering dynamics and parameters of nonlinear oscillatory and chaotic systems from partial observations<br>G Stepaniants, A D Hastewell, D J Skinner, J F Totz and J Dunkel<br>Phys Rev Research 6: 043062, 2024<br><br>Learning hydrodynamic equations for active matter from particle simulations and experiments<br>R Supekar, B Song, A D Hastewell, G P T Choi, A Mietke and J Dunkel<br>PNAS 120: e2206994120, 2023 <br><br>Learning developmental mode dynamics from single-cell trajectories<br>N Romeo, A D Hastewell, A Mietke and J Dunkel<br>eLife 10: e68679, 2021
Presenters
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Jorn Dunkel
Massachusetts Institute of Technology
Authors
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Jorn Dunkel
Massachusetts Institute of Technology