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V: Data Science I

ORAL · LL10 · ID: 1094435

Presentations

  • Design of β-sheet forming antimicrobial peptides using deep learning and molecular dynamics simulations

    ORAL

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    Publication: Samuel Renaud and R.A. Mansbach. "Latent Spaces for Antimicrobial Peptide Design." ChemRxiv preprint (2022). [https://doi.org/10.26434/chemrxiv-2022-m3900] (Submitted, Digital Discovery, 2022)<br>Mohammadreza Niknam Hamidabad, Lindsay Wright, Natalya A. Watson, and R.A. Mansbach. "Contributions of charge and multi-body interactions to the initial aggregate formation of the beta-sheet-forming antimicrobial peptide GL13K." (In preparation, 2022)

    Presenters

    • Rachael A Mansbach

      Concordia University

    Authors

    • Rachael A Mansbach

      Concordia University

    • Samuel Renaud

      Concordia University (Canada)

    • Lindsay Wright

      Concordia University

    • Mohammadreza Niknam Hamidabad

      Concordia University

    • Natalya Watson

      Concordia University

    View abstract →

  • Flagging of unacceptable segmentations: Monte Carlo dropout vs. Deep-Ensembles

    ORAL

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    Presenters

    • Zan Klanecek

      University of Ljubljana, Faculty of Mathematics and Physics

    Authors

    • Zan Klanecek

      University of Ljubljana, Faculty of Mathematics and Physics

    • Tobias Wagner

      KU Leuven, Department of Imaging and Pathology, Division of Medical Physics & Quality Assessment, Leuven, Belgium

    • Yao K Wang

      KU Leuven, Department of Imaging and Pathology, Division of Medical Physics & Quality Assessment, Leuven, Belgium

    • Lesley Cockmartin

      UZ Leuven, Department of Radiology, Leuven, Belgium

    • Nicholas Marshall

      KU Leuven, Department of Imaging and Pathology, Division of Medical Physics & Quality Assessment, Leuven, Belgium; UZ Leuven, Department of Radiology, Leuven, Belgium

    • Brayden Schott

      University of Wisconsin-Madison, Department of Medical Physics, Madison, U.S.A.

    • Ali Deatsch

      University of Wisconsin - Madison, University of Wisconsin-Madison, Department of Medical Physics, Madison, U.S.A.

    • Miloš Vrhovec

      Institute of Oncology Ljubljana, Ljubljana, Slovenia

    • Andrej Studen

      University of Ljubljana, Faculty of Mathematics and Physics, Medical Physics, Ljubljana, Slovenia; Jožef Stefan Institute, Ljubljana, Slovenia

    • Hilde Bosmans

      KU Leuven, Department of Imaging and Pathology, Division of Medical Physics & Quality Assessment, Leuven, Belgium; UZ Leuven, Department of Radiology, Leuven, Belgium

    • Robert Jeraj

      University of Ljubljana, Faculty of Mathematics and Physics, Medical Physics, Ljubljana, Slovenia; Jožef Stefan Institute, Ljubljana, Slovenia; University of Wisconsin-Madison

    View abstract →