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Non-Equilibrium Thermodynamics: From Natural Selection to Chemical Reaction Networks

FOCUS · A06 · ID: 1067914

Presentations

  • Efficient Two-Dimensional Control of Barrier Crossing

    ORAL

    –

    Publication: Steven Blaber and David A. Sivak Europhys Lett. 139, 17001 (2022)<br>https://doi.org/10.1209/0295-5075/ac765d

    Presenters

    • Steven Blaber

      Simon Fraser University

    Authors

    • Steven Blaber

      Simon Fraser University

    • David A Sivak

      Simon Fraser University

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  • Stochasticity and Homeostasis in Macromolecular Crowding and its Effects on the Rates of Reproduction

    ORAL

    –

    Publication: S. Nemati, A. Singh, S. D. Dhuey, A. McDonald, D. M. Weinreich, A. E. Vasdekis, Communications Biology 5, 397 (2022).

    Presenters

    • Andreas E Vasdekis

      University of Idaho

    Authors

    • Andreas E Vasdekis

      University of Idaho

    • Shahla Nemati

      University of Idaho

    • Abhyudai Singh

      University of Delaware

    • Scott Dhuey

      Lawrence Berkeley National Laboratory

    • Armando McDonald

      University of Idaho

    • Daniel Weinreich

      Brown University

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  • Quantifying biochemical reaction rates from static population variability within incompletely observed complex networks

    ORAL

    –

    Publication: Wittenstein, Timon, Nava Leibovich, and Andreas Hilfinger. "Quantifying biochemical reaction rates from static population variability within incompletely observed complex networks." PLoS computational biology 18.6 (2022): e1010183. https://doi.org/10.1371/journal.pcbi.1010183

    Presenters

    • Andreas Hilfinger

      Department of Physics, University of Toronto, Toronto, Canada, University of Toronto Mississauga

    Authors

    • Andreas Hilfinger

      Department of Physics, University of Toronto, Toronto, Canada, University of Toronto Mississauga

    • Nava Leibovich

      University of Toronto

    • Timon Wittenstein

      University of Mainz

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  • How to suppress stochastic fluctuations while achieving adaptation with biologically realistic integral controllers

    ORAL

    –

    Publication: Noise properties of adaptation-conferring biochemical control modules (planned paper in preparation)

    Presenters

    • Brayden J Kell

      University of Toronto

    Authors

    • Brayden J Kell

      University of Toronto

    • Andreas Hilfinger

      Department of Physics, University of Toronto, Toronto, Canada, University of Toronto Mississauga

    • Ryan Ripsman

      University of Toronto

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  • Analysis of the dynamics of the growing and branching network of filamentous fungus Podospora anserina.

    ORAL

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    Publication: Dikec, J., Olivier, A., Bobée, C. et al. Hyphal network whole field imaging allows for accurate estimation of anastomosis rates and branching dynamics of the filamentous fungus Podospora anserina. Sci Rep 10, 3131 (2020). https://doi.org/10.1038/s41598-020-57808-y<br>Ledoux C, Chapeland-Leclerc F, Ruprich-Robert G, Bobée C, Lalanne C, Herbert É, David P. Prediction and experimental evidence of the optimisation of the angular branching process in the thallus growth of Podospora anserina. Sci Rep. 2022 Jul 19;12(1):12351. doi: 10.1038/s41598-022-16245-9. PMID: 35853921; PMCID: PMC9296542.

    Presenters

    • Thibault Chassereau

      Laboratoire Interdisciplinaire des Energies de Demain

    Authors

    • Thibault Chassereau

      Laboratoire Interdisciplinaire des Energies de Demain

    • Éric Herbert

      Université Paris Cité

    • Florence Chapeland-Leclerc

      Laboratoire Interdisciplinaire des Energies de Demain

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