DBIO Dissertation Award (2021): Physics of Behavior Across Scales
ORAL · Invited
Abstract
Animal movement exhibits multiple time scales: from fine scale posture movements, to changes in navigation strategies driven by internal states, all the way up to aging. These disparate scales are often studied separately: long time behaviors are typically described through body centroid kinematics, while finer-scale behaviors are studied at the level of posture. Here we introduce a unifying formalism that bridges between these scales. Starting from posture measurements, we reconstruct a state space by concatenating measurements in time, building a maximum entropy partition of the resulting sequences, and choosing the sequence length to maximize predictive information. Trading non-linear trajectories for linear, ensemble evolution, we analyze reconstructed dynamics through transfer operators. The eigenvalues of the inferred transfer operators reveal a hierarchy of time scales, while the respective eigenvectors capture metastable states that correspond to long-lived behavioral states. Leveraging this analysis, we uncover slowly changing navigation strategies and predict large scale diffusive properties of centroid trajectories directly from fine-scale posture measurements. Additionally, we introduce slow non-ergodic drives that reflect changing internal states, resulting in behavioral dynamics that evolve in potential landscapes that fluctuate in time. We explore the consequences of such a picture and recover a number of statistical properties observed across behaving organisms, such as long-range correlations, heavy-tailed dwell-time distributions and non-Markovianity.
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Publication: 1) Helms, Rozemuller, Costa, Avery, Stephens and Shimizu; Modelling the ballistic-to-diffusive transition in nematode motility reveals variation in exploration across species. Journal of the Royal Society Interface 16, 20190174 (2019);<br>2) Costa, Ahamed, Stephens; Adaptive, locally-linear models of complex dynamics, Proceedings of the National Academy of Sciences of the United States of America 116,1501 (2019);<br>3) Ahamed, Costa, Stephens; Capturing the Continuous Complexity of Behavior in C. elegans, Nature Physics 17, 275–283 (2021)<br>4) Costa, Ahamed, Jordan, Stephens; Maximally-predictive ensemble dynamics from data arXiv:2105.12811 (2021)