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Non-equilibrium Thermodynamics: From Chemical Reaction Networks to Natural Selection II

FOCUS · Q04 · ID: 46278

Presentations

  • Learning Regulation from the Ground Up: Combining Natural Selection, Thermodynamics and Data

    ORAL

    –

    Publication: S. Britton, M. Alber, and W. R. Cannon, "Enzyme activities predicted by metabolite concentrations and solvent capacity in the cell," Journal of The Royal Society Interface, vol. 17, no. 171, p. 20200656, 2020, doi: doi:10.1098/rsif.2020.0656.

    Presenters

    • William R Cannon

      Pacific Northwest Natl Lab; UC Riverside

    Authors

    • Mark Alber

      University of California, Riverside, Department of Mathematics, University of California Riverside

    • William R Cannon

      Pacific Northwest Natl Lab; UC Riverside

    • Sam Britton

      University of California, Riverside

    • Jolene Britton

      UC Riverside; Pepperdine University

    View abstract →

  • Scaling relations of energy dissipation rate in nonequilibrium reaction systems

    ORAL

    –

    Publication: 1. Q. Yu, D. Zhang, and Y. Tu, Inverse power law scaling of energy dissipation rate in nonequilibrium reaction networks, Phys.Rev.Lett 126, 080601 (2021)<br>2. Q. Yu, D. Zhang, and Y. Tu, in preparation

    Presenters

    • Qiwei Yu

      Princeton University

    Authors

    • Qiwei Yu

      Princeton University

    • Dongliang Zhang

      Peking University

    • Yuhai Tu

      IBM TJ Watson Research Center, IBM T. J. Watson Research Center

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  • Decomposing the local arrow of time in interacting systems

    ORAL

    –

    Publication: Christopher W. Lynn, Caroline M. Holmes, William Bialek, and David J. Schwab. Decomposing the local arrow of time in interacting systems. In preparation.

    Presenters

    • Christopher W Lynn

      Princeton University, City University of New York

    Authors

    • Christopher W Lynn

      Princeton University, City University of New York

    • Caroline Holmes

      Princeton University

    • William S Bialek

      Princeton University

    • David J Schwab

      The Graduate Center, CUNY

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  • Life without oxygen: the energy saving mechanisms of anaerobic gut bacteria.

    ORAL

    –

    Presenters

    • Vadim Patsalo

      The Scripps Research Institute

    Authors

    • Vadim Patsalo

      The Scripps Research Institute

    • Brian R Taylor

      University of California San Diego, University of California, San Diego

    • Hiroyuki Okano

      University of California San Diego

    • Zhongge Zhang

      University of California San Diego, UCSD

    • James Williamson

      The Scripps Research Institute

    • Terence T Hwa

      University of California, San Diego, UCSD

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  • 3D diffusion in live Escherichia coli cells

    ORAL

    –

    Presenters

    • Diana S Mendez

      Princeton University

    Authors

    • Diana S Mendez

      Princeton University

    • Benjamin P Bratton

      Vanderbilt University Medical Center

    • Joseph P Sheehan

      Princeton University

    • Liam J Holt

      New York University

    • Zemer Gitai

      Princeton University

    • Joshua W Shaevitz

      Princeton University

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  • In vitro cell cycle oscillations exhibit a robust and hysteretic response to changes in cytoplasmic density

    ORAL

    –

    Publication: Jin, M., Tavella, F., Wang, S. and Yang, Q., 2021. In vitro cell cycle oscillations exhibit a robust and hysteretic response to changes in cytoplasmic density. bioRxiv, https://doi.org/10.1101/2021.05.19.444890<br>Under review in Proceedings of the National Academy of Sciences. (Submitted: 2021-07-30, Pending recommendation after review repsonse: 2021-10-17)

    Presenters

    • Franco Tavella

      University of MIchigan

    Authors

    • Franco Tavella

      University of MIchigan

    • Qiong Yang

      University of Michigan

    • Minjun Jin

      University of Michigan

    • Shiyuan Wang

      University of Michigan

    View abstract →

  • Ornstein-Uhlenbeck models of phenotypic selection and cellular evolution

    ORAL

    –

    Presenters

    • Gábor Balázsi

      State Univ of NY - Stony Brook, Stony Brook University (SUNY), Stony Brook University (SUNY), Biomedical Engineering Department and Laufer Center for Physical and Quantitative Biology, Stony Brook University

    Authors

    • Gábor Balázsi

      State Univ of NY - Stony Brook, Stony Brook University (SUNY), Stony Brook University (SUNY), Biomedical Engineering Department and Laufer Center for Physical and Quantitative Biology, Stony Brook University

    • Amr Ibrahim

      Stony Brook University

    • Yiming Wan

      Stony Brook University (SUNY), Stony Brook University (SUNY), Biomedical Engineering Department and Laufer Center for Physical and Quantitative Biology

    View abstract →