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COVID I. Physics of COVID-19 and Pandemics

FOCUS · M04 · ID: 46154

Presentations

  • Using molecular simulation to interpret weak cryo-EM density for the Spike protein post-fusion complex

    ORAL · Invited

    –

    Publication: Integrative structural studies of the SARS-CoV-2 Spike protein during the fusion process, Jacob C. Miner, Paul W. Fenimore, William M. Fischer, Benjamin H. McMahon, Karissa Y. Sanbonmatsu and Chang-Shung Tung, submitted.<br>

    Presenters

    • Karissa Sanbonmatsu

      Los Alamos Natl Lab

    Authors

    • Karissa Sanbonmatsu

      Los Alamos Natl Lab

    • Chang-Shung Tung

      Los Alamos National Laboratory

    View abstract →

  • Helium-ion microscopy reveals an intra-cytoplasmic route for SARS-CoV-2 cell-cell transmission

    ORAL

    –

    Publication: Merolli A, Kasaei L, Ramsamy S, Kolloli A, Kumar R, Subbian S, Feldman LC. An intra-cytoplasmic route for SARS-CoV-2 transmission unveiled by Helium-ion microscopy. Submitted to "Scientific Reports"

    Presenters

    • Antonio Merolli

      Rutgers University

    Authors

    • Antonio Merolli

      Rutgers University

    • Leila Kasaei

      Rutgers University, Rutgers University, New Brunswick

    • Santhamani Ramasamy

      Rutgers University

    • Afsal Kolloli

      Rutgers University

    • Ranjeet Kumar

      Rutgers University

    • Selvakumar Subbian

      Rutgers University

    • Leonard C Feldman

      Rutgers University, New Brunswick

    View abstract →

  • Extracellular vimentin as a target against SARS-CoV-2 host cell invasion

    ORAL

    –

    Publication: Preprint: Extracellular vimentin as a target against SARS-CoV-2 host cell invasion (bioRxiv) DOI: 10.1101/2021.01.08.425793

    Presenters

    • Maxx Swoger

      Syracuse University

    Authors

    • Maxx Swoger

      Syracuse University

    • Łukasz Suprewicz

      Medical University of Białystok

    • Sarthak Gupta

      Syracuse University

    • Danielle Germann

      Syracuse University

    • Paul Janmey

      University of Pennsylvania

    • Jennifer M Schwarz

      Syracuse University

    • Robert Bucki

      Medical University of Białystok

    • Alison E Patteson

      Syracuse University

    View abstract →

  • Binding Mechanism of SARS-CoV(-2) into hACE2 Receptor

    ORAL

    –

    Publication: J. Phys. Commun. 5 (2021)035010

    Presenters

    • Narayan P Adhikari

      Central Department of Physics, Tribhuvan University, Nepal, Central Department of Physics Tribhuvan University Kathmandu Nepal

    Authors

    • Narayan P Adhikari

      Central Department of Physics, Tribhuvan University, Nepal, Central Department of Physics Tribhuvan University Kathmandu Nepal

    • Bidhya Thapa

      Central Department of Physics Tribhuvan University Kathmandu Nepal

    • Rajendra P Koirala

      Central Department of Physics Tribhuvan University Kathmandu Nepal

    • Shyam P Khanal

      Central Department of Physics Tribhuvan University Kathmandu Nepal

    • Jhulan Powrel

      Central Department of Physics Tribhuvan University Kathmandu Nepal

    • Lokendra S Dhami

      Central Department of Physics Tribhuvan University Kathmandu Nepal

    • Lalit Dhami

      Central Department of Physics Tribhuvan University Kathmandu Nepal

    View abstract →

  • Modeling within-host SARS-CoV-2 dynamics and the relationship between viral load and a person's infectiousness

    ORAL · Invited

    –

    Publication: Ke, R.,Zitzmann, C., Ho, D. D., Ribeiro, R. M. and Perelson, A. S. (2021). In vivo kinetics of SARS-CoV-2<br>infection and its relationship to a person's infectiousness. Proc. Natl. Acad. Sci. USA (in press).<br><br>Ke, R.,Zitzmann, C., Ribeiro, R. M. and Perelson, A. S. (2020). Kinetics of SARS-CoV-2 infection in the human upper and lower respiratory tracts and their relationship with infectiousness. MedRxiv 2020.09.25.20201772; doi: https://doi.org/10.1101/2020.09.25.20201772 .

    Presenters

    • Alan S Perelson

      Los Alamos Natl Lab

    Authors

    • Alan S Perelson

      Los Alamos Natl Lab

    View abstract →

  • Inferring the effects of mutations on SARS-CoV-2 transmission from genomic surveillance data

    ORAL

    –

    Publication: [1] Sohail, M. S., Louie, R. H., McKay, M. R., & Barton, J. P. (2021). MPL resolves genetic linkage in fitness inference from complex evolutionary histories. Nature Biotechnology, 39(4), 472-479.

    Presenters

    • John P Barton

      University of California, Riverside

    Authors

    • John P Barton

      University of California, Riverside

    • Brian Lee

      University of California, Riverside

    • Syed Ahmed

      Hong Kong University of Science and Technology, Hong Kong, Hong Kong University of Science and Technology

    • Elizabeth Finney

      University of California, Riverside

    • Ahmed Quadeer

      Hong Kong University of Science and Technology, Hong Kong, Hong Kong University of Science and Technology

    • Muhammad Sohail

      Hong Kong University of Science and Technology, Hong Kong, Hong Kong University of Science and Technology

    • Matthew McKay

      University of Melbourne, Australia, University of Melbourne

    View abstract →

  • Back projection methods for the refinement of SARS-Cov-2 sequence data

    ORAL

    –

    Presenters

    • Elizabeth Finney

      University of California, Riverside

    Authors

    • Elizabeth Finney

      University of California, Riverside

    • John P Barton

      University of California, Riverside

    • Brian Lee

      University of California, Riverside

    • Syed Ahmed

      Hong Kong University of Science and Technology, Hong Kong, Hong Kong University of Science and Technology

    • Ahmed Quadeer

      Hong Kong University of Science and Technology, Hong Kong, Hong Kong University of Science and Technology

    • Muhammad Sohail

      Hong Kong University of Science and Technology, Hong Kong, Hong Kong University of Science and Technology

    • Matthew McKay

      University of Melbourne, Australia, University of Melbourne

    View abstract →