Physics of Proteins III: Evolution and Function of Molecular Interactions
FOCUS · K06 · ID: 46198
Presentations
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Conservative interactions in protein evolution
ORAL · Invited
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Presenters
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Wouter D Hoff
Oklahoma State University-Stillwater, Okahoma State University
Authors
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Wouter D Hoff
Oklahoma State University-Stillwater, Okahoma State University
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On the role of multiple states in allostery
ORAL
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Presenters
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Eric Rouviere
University of Chicago
Authors
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Eric Rouviere
University of Chicago
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Olivier Rivoire
Collège de France
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Rama Ranganathan
University of Chicago
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Quantifying protein interactions in a living organism
ORAL
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Presenters
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Aniket Ravan
University of Illinois at Urbana-Champai
Authors
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Aniket Ravan
University of Illinois at Urbana-Champai
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Yann R Chemla
University of Illinois at Urbana-Champaign
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Martin Gruebele
University of Illinois at Urbana-Champaign
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Many sequence-diverse protein domains switch between α-helix and β-sheet folds
ORAL · Invited
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Publication: "Pervasive fold switching in a ubiquitous protein superfamily" bioRxiv https://www.biorxiv.org/content/10.1101/2021.06.10.447921v1.abstract<br><br>"A sequence-based method for predicting extant fold switchers that undergo α-helix ↔ β-strand transitions" (2021) Biopolymers https://doi.org/10.1002/bip.23471<br><br>"A high-throughput predictive method for sequence-similar fold switchers" (2021) Biopolymers https://doi.org/10.1002/bip.23471<br><br>"Extant fold-switching proteins are widespread" (2018) PNAS https://doi.org/10.1073/pnas.1800168115
Presenters
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Lauren Porter
National Institutes of Health - NIH
Authors
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Lauren Porter
National Institutes of Health - NIH
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Preferential Exclusion and Hydration Dynamics in Compatible Osmolyte Solutions
ORAL
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Publication: Nimesh Shukla, Brianna Bembenek, Erika A. Taylor, and Christina M. Othon; "Conformational Consequences for Compatible Osmolytes on Thermal Denaturation" (2021) <br>N. Shukla, C.J.S. Hect, J. Goeks, E. A. Taylor, C. M. Othon "Hydration Dynamics in Solutions of Cyclic Polyhydroxyl Osmolytes", Journal of Physical Chemistry B, 123 (40), 8472-8479. (2019) <br>N. Shukla, E. Pomarico, L. Chen, M. Chergui, and C. M. Othon "Retardation of Bulk Water Dynamics by Disaccharide Osmolytes", J. Phys. Chem. B, 2016, 120 (35), pp 9477–9483. (2016)
Presenters
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Christina Othon
Ripon College
Authors
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Christina Othon
Ripon College
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Nimesh Shukla
KLA
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Erika Taylor
Wesleyan University
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Brianna Bembenek
Ripon College
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Quantifying Tubulin Heterodimer Assembly in vitro and Cells
ORAL
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Presenters
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Yuhan Wang
University of Illinois at Urbana-Champaign
Authors
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Yuhan Wang
University of Illinois at Urbana-Champaign
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Mahima Unnikrishnan
University of Illinois at Urbana-Champaign
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Brooke Ramsey
University of Illinois at Urbana-Champaign
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Catherine J Murphy
University of Illinois at Urbana-Champaign
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Martin Gruebele
University of Illinois at Urbana-Champaign
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Comparison of α-conotoxin free energy landscapes via simulation and dimensionality reduction
ORAL
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Presenters
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Natalya Watson
Concordia University
Authors
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Ré A Mansbach
Concordia University
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Natalya Watson
Concordia University
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A Superstatistical Variational Model for Categorical Data: Applications to Protein Sequence Variation
ORAL
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Presenters
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Hoda Akl
University of Florida
Authors
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Hoda Akl
University of Florida
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Purushottam Dixit
University of Florida
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Xiaochuan Zhao
University of Florida
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A mechanochemical protein model reveals the principles of molecular discrimination.
ORAL
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Presenters
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John M McBride
Institute for Basic Science
Authors
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John M McBride
Institute for Basic Science
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Tsvi Tlusty
Institute for Basic Science
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Jean-Pierre Eckmann
University of Geneva
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Modeling sequence-space exploration and emergence of epistatic signals in protein evolution
ORAL
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Publication: https://arxiv.org/abs/2106.02441
Presenters
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Francesco Zamponi
CNRS and Ecole Normale Superieure, Paris
Authors
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Francesco Zamponi
CNRS and Ecole Normale Superieure, Paris
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