Physics of Proteins III: Evolution and Function of Molecular Interactions
FOCUS · K06 · ID: 46198
Presentations
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Conservative interactions in protein evolution
ORAL · Invited
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Presenters
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Wouter D Hoff
Oklahoma State University-Stillwater, Okahoma State University
Authors
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Wouter D Hoff
Oklahoma State University-Stillwater, Okahoma State University
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On the role of multiple states in allostery
ORAL
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Presenters
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Eric Rouviere
University of Chicago
Authors
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Eric Rouviere
University of Chicago
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Olivier Rivoire
Collège de France
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Rama Ranganathan
University of Chicago
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Quantifying protein interactions in a living organism
ORAL
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Presenters
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Aniket Ravan
University of Illinois at Urbana-Champai
Authors
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Aniket Ravan
University of Illinois at Urbana-Champai
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Yann R Chemla
University of Illinois at Urbana-Champaign
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Martin Gruebele
University of Illinois at Urbana-Champaign
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Many sequence-diverse protein domains switch between α-helix and β-sheet folds
ORAL · Invited
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Publication: "Pervasive fold switching in a ubiquitous protein superfamily" bioRxiv https://www.biorxiv.org/content/10.1101/2021.06.10.447921v1.abstract
"A sequence-based method for predicting extant fold switchers that undergo α-helix ↔ β-strand transitions" (2021) Biopolymers https://doi.org/10.1002/bip.23471
"A high-throughput predictive method for sequence-similar fold switchers" (2021) Biopolymers https://doi.org/10.1002/bip.23471
"Extant fold-switching proteins are widespread" (2018) PNAS https://doi.org/10.1073/pnas.1800168115Presenters
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Lauren Porter
National Institutes of Health - NIH
Authors
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Lauren Porter
National Institutes of Health - NIH
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Preferential Exclusion and Hydration Dynamics in Compatible Osmolyte Solutions
ORAL
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Publication: Nimesh Shukla, Brianna Bembenek, Erika A. Taylor, and Christina M. Othon; "Conformational Consequences for Compatible Osmolytes on Thermal Denaturation" (2021)
N. Shukla, C.J.S. Hect, J. Goeks, E. A. Taylor, C. M. Othon "Hydration Dynamics in Solutions of Cyclic Polyhydroxyl Osmolytes", Journal of Physical Chemistry B, 123 (40), 8472-8479. (2019)
N. Shukla, E. Pomarico, L. Chen, M. Chergui, and C. M. Othon "Retardation of Bulk Water Dynamics by Disaccharide Osmolytes", J. Phys. Chem. B, 2016, 120 (35), pp 9477–9483. (2016)Presenters
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Christina Othon
Ripon College
Authors
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Christina Othon
Ripon College
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Nimesh Shukla
KLA
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Erika Taylor
Wesleyan University
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Brianna Bembenek
Ripon College
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Quantifying Tubulin Heterodimer Assembly in vitro and Cells
ORAL
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Presenters
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Yuhan Wang
University of Illinois at Urbana-Champaign
Authors
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Yuhan Wang
University of Illinois at Urbana-Champaign
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Mahima Unnikrishnan
University of Illinois at Urbana-Champaign
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Brooke Ramsey
University of Illinois at Urbana-Champaign
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Catherine J Murphy
University of Illinois at Urbana-Champaign
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Martin Gruebele
University of Illinois at Urbana-Champaign
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Comparison of α-conotoxin free energy landscapes via simulation and dimensionality reduction
ORAL
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Presenters
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Natalya Watson
Concordia University
Authors
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Ré A Mansbach
Concordia University
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Natalya Watson
Concordia University
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A Superstatistical Variational Model for Categorical Data: Applications to Protein Sequence Variation
ORAL
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Presenters
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Hoda Akl
University of Florida
Authors
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Hoda Akl
University of Florida
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Purushottam Dixit
University of Florida
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Xiaochuan Zhao
University of Florida
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A mechanochemical protein model reveals the principles of molecular discrimination.
ORAL
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Presenters
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John M McBride
Institute for Basic Science
Authors
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John M McBride
Institute for Basic Science
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Tsvi Tlusty
Institute for Basic Science
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Jean-Pierre Eckmann
University of Geneva
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Modeling sequence-space exploration and emergence of epistatic signals in protein evolution
ORAL
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Publication: https://arxiv.org/abs/2106.02441
Presenters
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Francesco Zamponi
CNRS and Ecole Normale Superieure, Paris
Authors
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Francesco Zamponi
CNRS and Ecole Normale Superieure, Paris
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