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Physics of Proteins I: Structure & Dynamics of Proteins I

FOCUS · D06 · ID: 46186

Presentations

  • Photoswitching of Terahertz Structural Dynamics in the Photosynthesis Photo Protective Orange Carotenoid Protein

    ORAL

    –

    Publication: 1. Deng, Y. T.; McKinney, J. A.; George, D. K.; Niessen, K. A.; Sharma, A.; Markelz, A. G., Near-Field Stationary Sample Terahertz Spectroscopic Polarimetry for Biomolecular Structural Dynamics Determination. Acs Photonics 2021, 8 (2), 658-668.<br><br>2. J. A. McKinney, Yanting Deng, Deepu K. George, Robert Thompson, Tod Romo, Alan Grossfield, Xing Liu, Cheryl Kerfeld and A. G. Markelz, Photoswitching of Terahertz Structural Dynamics in the Photosynthesis Photo Protective Orange Carotenoid Protein, to be submitted.

    Presenters

    • Andrea G Markelz

      State Univ of NY - Buffalo

    Authors

    • Jeffrey A Mckinney

      State Univ of NY - Buffalo, State Univ of NY, Research Foundation of SUNY

    • Deepu K George

      State Univ of NY - Buffalo

    • Yanting Deng

      State Univ of NY - Buffalo

    • Robert R Thompson

      Markelz Lab, University at Buffalo, SUNY

    • Cheryl Kerfeld

      Michigan State University

    • Xing Liu

      University at Buffalo, SUNY

    • Tod Romo

      Univ. of Rochester Medical School, Univ of Rochester, University of Rochester Medical Center, University of Rochester Medical School

    • Alan Grossfield

      Univ of Rochester, University of Rochester Medical Center, University of Rochester Medical Campus

    • Andrea G Markelz

      State Univ of NY - Buffalo

    View abstract →

  • Probing Protein Motions for Sequence Fidelity Control or Information Detection along DNA

    ORAL

    –

    Publication: 1) Liqiang Dai, Yongping Xu, Zhenwei Du, Xiao-dong Su*, and Jin Yu*. Revealing Atomic-scale Molecular Diffusion of a Plant Transcription Factor WRKY Domain Protein along DNA. Proc Natl Acad Sci USA 2021, 118 (23) e2102621118 <br>2) Moises E Romero, Chunhong Long, Daniel La Rocco, Anusha M Keerthi, Dajun Xu, and Jin Yu*. Probing remdesivir nucleotide analogue insertion to SARS-CoV-2 RNA dependent RNA polymerase in viral replication. Molecular Systems Design & Engineering, 2021, DOI: 10.1039/D1ME00088H <br>3) Chunhong Long, Chao E, Lin-Tai Da, and Jin Yu*. Determining selection free energetics from nucleotide pre-insertion to insertion in viral T7 RNA polymerase transcription fidelity control. Nucleic Acids Research 47(9), 4721-4735, 2019

    Presenters

    • Jin Yu

      University of California, Irvine

    Authors

    • Jin Yu

      University of California, Irvine

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  • Photo-response of Photoreceptor Proteins Based on Graphene Field Effect Transistors

    ORAL

    –

    Presenters

    • Yifei Wang

      Department of Physics and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, Virginia 24061, United States, Virginia Tech

    Authors

    • Yifei Wang

      Department of Physics and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, Virginia 24061, United States, Virginia Tech

    • Ho X Vinh

      Virginia Tech

    • Leslie Howe

      Virginia Tech

    • Rosalie Dohmen

      Oklahoma State University-Stillwater

    • Wouter D Hoff

      Oklahoma State University-Stillwater, Okahoma State University

    • Vinh Q Nguyen

      Department of Physics and Center for Soft Matter and Biological Physics, Virginia Tech, Blacksburg, Virginia 24061, United States, Virginia Tech

    View abstract →

  • From quantum connectivity to biological networks: A window into proteins

    ORAL · Invited

    –

    Publication: 1. V.Gadiyaram et al., J. Chem. Inf. Model. (2019), 59, 5, 1715–1727. <br><br> 2. A. Halder et al., Front. Mol. Biosci. (2020) 7:596945. <br><br>3. V. Gadiyaram et al., J Complex Networks. 2017;5(2):219-244.

    Presenters

    • Saraswathi Vishveshwara

      Indian Institute of Science

    Authors

    • Saraswathi Vishveshwara

      Indian Institute of Science

    View abstract →

  • Crystal Symmetry Effects on Protein Anisotropic Absorption

    ORAL

    –

    Publication: 1. Deng, Y.T., et al., Near-Field Stationary Sample Terahertz Spectroscopic Polarimetry for Biomolecular Structural Dynamics Determination, Acs Photonics, 2021. 10.1021/acsphotonics.0c01876.<br><br>2. Niessen, K.A., et al., Protein and RNA dynamical fingerprinting, Nat. Comm., 2019. https://dx.doi.org/10.1038/s41467-019-08926-3.

    Presenters

    • Alexander J McNulty-Romaguera

      State Univ of NY - Buffalo

    Authors

    • Alexander J McNulty-Romaguera

      State Univ of NY - Buffalo

    • Jeffrey A Mckinney

      State Univ of NY - Buffalo, State Univ of NY, Research Foundation of SUNY

    • Deepu K George

      State Univ of NY - Buffalo

    • Xiaotong Zhang

      State Univ of NY - Buffalo, State Univ of NY-Buffalo, University at Buffalo SUNY

    • Jason Benedict

      State Univ of NY - Buffalo, University at Buffalo SUNY

    • Tod Romo

      Univ. of Rochester Medical School, Univ of Rochester, University of Rochester Medical Center, University of Rochester Medical School

    • Alan Grossfield

      Univ of Rochester, University of Rochester Medical Center, University of Rochester Medical Campus

    • Andrea G Markelz

      State Univ of NY - Buffalo

    View abstract →