Capturing the local entropy production by data compression
ORAL
Abstract
We introduce a universal protocol to estimate local entropy production by data compression. The Kullback-Leibler divergence (KLD), or relative entropy, between the probability of observing a trajectory with time running forward and its time reversal quantitatively characterizes the breakdown of time-reversal symmetry and gives the entropy production of non-equilibrium steady states. Here we use a cross-parsing compression algorithm (Ziv-Merhav) to estimate KLD between two individual sequences. By compressing the forward time sequence of states using its time reversed, we obtain a close estimation of the entropy production for finite state systems. A natural spatial decomposition of entropy production can then be defined by applying the algorithms on time series of local representation of states, which gives a spatial distribution of the local entropy production. We validate this method on motility-induced phase separation of active Brownian particles systems. The local entropy production distributions show good agreement among MD simulation, lattice model and active field theory. Experimental systems such as bacterias driven by funnel structures are also analyzed.
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Presenters
Buming Guo
New York University
Authors
Buming Guo
New York University
Sunghan Ro
Technion - Israel Institute of Technology
Aaron Shih
University of Minnesota
Trung Phan
Princeton University
Stefano Martiniani
University of Minnesota, Chemical Engineering and Materials Science, University of Minnesota, Department of Chemical Engineering and Materials Science, University of Minnesota, Department of Chemical Engineering and Materials Science, University of Minnnesota
Dov Levine
Department of Physics, Technion - IIT, Technion - Israel Institute of Technology, Physics, Technion - IIT
Robert Austin
Princeton University
Paul M Chaikin
Center for Soft Matter Research, New York University, New York University, Center for Soft Matter Research, Physics, New York University, New York Univ NYU