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Capturing the local entropy production by data compression

ORAL

Abstract

We introduce a universal protocol to estimate local entropy production by data compression. The Kullback-Leibler divergence (KLD), or relative entropy, between the probability of observing a trajectory with time running forward and its time reversal quantitatively characterizes the breakdown of time-reversal symmetry and gives the entropy production of non-equilibrium steady states. Here we use a cross-parsing compression algorithm (Ziv-Merhav) to estimate KLD between two individual sequences. By compressing the forward time sequence of states using its time reversed, we obtain a close estimation of the entropy production for finite state systems. A natural spatial decomposition of entropy production can then be defined by applying the algorithms on time series of local representation of states, which gives a spatial distribution of the local entropy production. We validate this method on motility-induced phase separation of active Brownian particles systems. The local entropy production distributions show good agreement among MD simulation, lattice model and active field theory. Experimental systems such as bacterias driven by funnel structures are also analyzed.

Presenters

  • Buming Guo

    New York University

Authors

  • Buming Guo

    New York University

  • Sunghan Ro

    Technion - Israel Institute of Technology

  • Aaron Shih

    University of Minnesota

  • Trung Phan

    Princeton University

  • Stefano Martiniani

    University of Minnesota, Chemical Engineering and Materials Science, University of Minnesota, Department of Chemical Engineering and Materials Science, University of Minnesota, Department of Chemical Engineering and Materials Science, University of Minnnesota

  • Dov Levine

    Department of Physics, Technion - IIT, Technion - Israel Institute of Technology, Physics, Technion - IIT

  • Robert Austin

    Princeton University

  • Paul M Chaikin

    Center for Soft Matter Research, New York University, New York University, Center for Soft Matter Research, Physics, New York University, New York Univ NYU