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Winner-take-all dynamics in self-assembly

ORAL

Abstract

Understanding competitive nucleation between different crystal polymorphs is critical for the selective self-assembly of any particular structure. For crystals made of one or a few components, selectivity is often accomplished through carefully designed annealing protocols. In highly multi-component systems, we argue for a new winner-take-all mechanism that enhances selectivity through depletion. For such systems, nucleation and growth of one structure can deplete monomers in a way that dramatically reduces the nucleation rates of all other structures without significantly affecting its own nucleation rate. We identify regimes of winner-take-all depletion using theory and rare-event sampling methods in multi-component self-assembly with unequal component concentrations. We present experimental evidence for such winner-take-all dynamics in a system of single-stranded DNA molecules able to assemble into three distinct two-dimensional crystal configurations.

Presenters

  • Jackson O'Brien

    Physics, University of Chicago

Authors

  • Jackson O'Brien

    Physics, University of Chicago

  • Constantine G Evans

    Hamilton Institute, Maynooth University

  • Erik Winfree

    Computer Science, Computation and Neural Systems, Bioengineering, California Institute of Technology

  • Arvind Murugan

    Physics, University of Chicago, University of Chicago