Physics of Proteins II

Presentations

• Towards integrative structural biology of proteins at ultra-high resolution

  ORAL

  March 16, 2021, 9:00 AM – March 16, 2021, 9:12 AM

  Presenters

  • Wouter Hoff

    Oklahoma State University-Stillwater

  Authors

  • Wouter Hoff

    Oklahoma State University-Stillwater

  • Junpei Matsuo

    Saga University

  • Takashi Kikukawa

    Hokkaido University

  • Tomotsumi Fujisawa

    Saga University

  • Masashi Unno

    Saga University

  • Aihua Xie

    Oklahoma State University-Stillwater, Oklahoma State

  View abstract →

• Probing Dynamics of Hemeproteins in Solution by the High Sensitivity Dielectric Terahertz Spectroscopy

  ORAL

  March 16, 2021, 9:12 AM – March 16, 2021, 9:24 AM

  Presenters

  • Luan Doan

    Virginia Tech

  Authors

  • Luan Doan

    Virginia Tech

  • Sarah Seay

    Virginia Tech

  • Vinh Q Nguyen

    Virginia Tech, Department of Physics and Center for Soft Matter and Biological Physics, Virginia Tech

  View abstract →

• Investigation of Electrical Conductance in Immobilized Zebrafish Cryptochrome (zfCRY4) Protein

  ORAL

  March 16, 2021, 9:24 AM – March 16, 2021, 9:36 AM

  Presenters

  • Anh Nguyen

    Department of Physics, University of California, Santa Cruz

  Authors

  • Anh Nguyen

    Department of Physics, University of California, Santa Cruz

  • Carrie Partch

    Department of Chemistry and Biochemistry, University of California, Santa Cruz

  • David Lederman

    University of California, Santa Cruz, Physics Department, University of California, Santa Cruz, Department of Physics, University of California, Santa Cruz, University of California - Santa Cruz

  View abstract →

• Computational Studies of Asymmetric Conformational Dynamics of AAA+ Machines Involved in Protein Disaggregation

  ORAL

  March 16, 2021, 9:36 AM – March 16, 2021, 9:48 AM

  Presenters

  • Ashan Dayananda

    University Of Cincinnati

  Authors

  • Ashan Dayananda

    University Of Cincinnati

  • Ruxandra I Dima

    University Of Cincinnati

  • George N Stan

    University Of Cincinnati

  View abstract →

• A Comparison of the Slow Dynamics in the Protein Ubiquitin Predicted by the LE4PD, PCA, and tICA from a Long Equilibrium Molecular Dynamics Simulation

  ORAL

  March 16, 2021, 9:48 AM – March 16, 2021, 10:00 AM

  Presenters

  • Eric Beyerle

    University of Oregon

  Authors

  • Eric Beyerle

    University of Oregon

  • Marina Giuseppina Guenza

    University of Oregon

  View abstract →

• Combining Consensus and Ensemble Docking Methods Improves Molecular Docking

  ORAL

  March 16, 2021, 10:00 AM – March 16, 2021, 10:12 AM

  Presenters

  • Connor Morris

    Brigham Young University

  Authors

  • Connor Morris

    Brigham Young University

  • Brenden Stark

    Brigham Young University

  • Dennis Della Corte

    Brigham Young University

  View abstract →

• TBD

  Invited

  March 16, 2021, 10:12 AM – March 16, 2021, 10:48 AM

  Presenters

  • Ruth Nussinov

    NIH

  Authors

  • Ruth Nussinov

    NIH

  View abstract →

• Binding mechanism of SARS-CoV-2 spike protein with human ACE2 receptor

  ORAL

  March 16, 2021, 10:48 AM – March 16, 2021, 11:00 AM

  Presenters

  • Narayan Adhikari

    Central Department of Physics, Tribhuvan University Nepal, Central Department of Physics, Tribhuvan University, Nepal

  Authors

  • Rajendra Koirala

    Central Department of Physics, Tribhuvan University Nepal, Central Department of Physics, Tribhuvan University, Nepal

  • Bidhya Thapa

    Physics, Padhma Kanya Campus Tribhuvan University

  • Shyam Khanal

    Central Department of Physics, Tribhuvan University, Nepal, Central Department of Physics, Tribhuvan University Nepal

  • Jhulan Powrel

    Central Department of Physics, Tribhuvan University Nepal

  • Rajendra P Adhikari

    Natural Science, Kathmandu

  • Narayan Adhikari

    Central Department of Physics, Tribhuvan University Nepal, Central Department of Physics, Tribhuvan University, Nepal

  View abstract →

• Flow sensing in the bacterial flagellar motor of <i>E. Coli</i>

  ORAL

  March 16, 2021, 11:00 AM – March 16, 2021, 11:12 AM

  Presenters

  • Faris Sinjab

    Univ of Edinburgh

  Authors

  • Faris Sinjab

    Univ of Edinburgh

  • Ekaterina Krasnopeeva

    Univ of Edinburgh

  • Jerko Rosko

    Univ of Edinburgh

  • Teuta Pilizota

    Univ of Edinburgh

  View abstract →

• Coarse-grained model of dielectric geometry-modified screened electrostatic protein-protein interactions

  ORAL

  March 16, 2021, 11:12 AM – March 16, 2021, 11:24 AM

  Presenters

  • Joshua Dickie

    Rochester Institute of Technology

  Authors

  • Joshua Dickie

    Rochester Institute of Technology

  • David S. Ross

    Rochester Institute of Technology

  • John Hamilton

    Rochester Institute of Technology

  • Christopher W. Wahle

    Video Gaming Technologies, Inc.

  • George Thurston

    Rochester Institute of Technology

  View abstract →

• van der Waals Forces in Biomolecular Systems: from Solvation to Long-range Interaction Mechanisms

  ORAL

  March 16, 2021, 11:24 AM – March 16, 2021, 11:36 AM

  Presenters

  • Martin Stoehr

    University of Luxembourg, Department of Physics and Materials Science, University of Luxembourg, University of Luxembourg Limpertsberg

  Authors

  • Martin Stoehr

    University of Luxembourg, Department of Physics and Materials Science, University of Luxembourg, University of Luxembourg Limpertsberg

  • Matteo Gori

    Quantum Biology Laboratory, Howard University, University of Luxembourg, University of Luxembourg Limpertsberg

  • Philip Kurian

    Quantum Biology Laboratory, Howard University, Howard University

  • Alexandre Tkatchenko

    University of Luxembourg Limpertsberg, University of Luxembourg, Department of Physics and Materials Science, University of Luxembourg, Univ Luxembourg

  View abstract →

• Electron transport through single proteins, peptides and amino acids

  ORAL

  March 16, 2021, 11:36 AM – March 16, 2021, 11:48 AM

  Presenters

  • Linda Angela Zotti

    Univ de Sevilla

  Authors

  • Carlos Romero-Muñiz

    Universidad Pablo de Olavide

  • María Ortega

    Universidad Autónoma de Madrid

  • Jose Guilherme Vilhena

    University of Basel

  • Ismael Diéz-Pérez

    King's College London

  • Ruben Perez

    Universidad Autónoma de Madrid

  • Juan Carlos Cuevas

    Departamento de Física de la Materia Condensada, Universidad Autónoma de Madrid, Departamento de Física Teórica de la Materia Condensada and Condensed Matter Physics Center (IFIMAC), Universidad Autónoma de Madrid, Universidad Autónoma de Madrid

  • Linda Angela Zotti

    Univ de Sevilla

  View abstract →

• Multi-Scale Computational Study on SARS-CoV and SARS-CoV-2

  ORAL

  March 16, 2021, 11:48 AM – March 16, 2021, 12:00 PM

  Presenters

  • Yixin Xie

    Computational Science, University of Texas at El Paso

  Authors

  • Yixin Xie

    Computational Science, University of Texas at El Paso

  • Lin Li

    Computational Science, University of Texas at El Paso

  View abstract →