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Enhanced diffusion and enzyme dissociation at high substrate concentration

ORAL

Abstract

The concept that catalytic enzymes can act as molecular machines transducing chemical activity into motion has conceptual and experimental support, but much of the claimed support comes from experimental conditions where the substrate concentration exceeds kM (the Michaelis-Menten constant), meaning that it exceeds concentrations that are biologically relevant. Moreover, many of the enzymes studied experimentally to date are oligomeric. Urease, a hexamer of subunits, has been considered to be the gold standard demonstrating enhanced diffusion. Here we show that urease and certain other oligomeric enzymes of high catalytic activity above kM dissociate into their smaller subunit fragments that diffuse more rapidly, thus providing a simple physical mechanism of enhanced diffusion in this regime of concentrations. Data for urease are presented in the main text and the conclusion is validated for hexokinase and acetylcholinesterase with data presented in supplementary information. For substrate concentration regimes below kM at which these enzymes do not dissociate, we validate that enzymatic catalysis does lead to the enhanced diffusion phenomenon.

Presenters

  • Ah-Young Jee

    Institute for Basic Science

Authors

  • Ah-Young Jee

    Institute for Basic Science

  • Kuo Chen

    Beijing National Research Center for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences

  • Tsvi Tlusty

    Institute for Basic Science

  • Jiang Zhao

    Beijing National Research Center for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences

  • Steve Granick

    Institute for Basic Science, IBS Center for Soft and Living Matter, Institute of Basic Sciences, Ulsan National Institute of Science and Technology, Institute of Basic Science, Center for soft and living matter, Center for Soft and Living Matter, Institute for Basic Science, Ulsan Natl Inst of Sci & Tech