Information efficiency of bacterial chemotaxis
ORAL
Abstract
Information transfer is central to the function of many biological systems. For example, the bacteria Escherichia coli climbs gradients of chemical attractants by modulating its rate of tumbling—randomly reorienting its swimming direction—when it senses time-changes in attractant concentration. But even in the absence of signal processing, the cell’s tumble behavior is correlated with the signal it sees. The transfer entropy rate Iφ→M from signal to tumble behavior removes these correlations and isolates the causal influence of the signal on the cell’s tumble decisions. We show that climbing a gradient with drift speed vD requires an information rate of at least Iφ→M = 12 Dr (vD/v0)2 (1-TB), where Dr is the rate of rotational diffusion, v0 is the run speed, and TB is the fraction of time the cell is tumbling. To quantify E. coli cells' information rates, we measure, in single cells, signal transduction responses and fluctuations. Along with measurements of drift speeds, we determine how efficiently E. coli use information about the gradient during chemotaxis.
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Presenters
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Henry Mattingly
Yale University, MCDB & Physics, Yale University
Authors
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Henry Mattingly
Yale University, MCDB & Physics, Yale University
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Keita Kamino
Yale University
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Xiaowei Zhang
Peking University
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Benjamin B Machta
Physics, Yale University, Yale University, Department of Physics, Yale University
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Thierry Emonet
Yale University, MCDB & Physics, Yale University