Iso-Flux Tension Propagation Theory and It's Application to Driven Polymer Translocation

COFFEE_KLATCH · Invited

Abstract

The translocation dynamics of polymers though nanopores driven by external fields is a far-from-equilibrium process, which is described by the tension propagation (TP) theory of Sakaue [1]. In particular, the Brownian Dynamics TP theory within the iso-flux (IFTP) assumption [2] allows a self-consistent derivation of analytic equations of motion for the dynamics, including an explicit form for the chain length dependence of the average translocation time [3]. In this talk I will discuss the application of IFTP theory to the case of a flickering pore and an oscillating external driving force [4], and translocation dynamics of semi-flexible polymer chains [5]. \\ 1. T. Sakaue, Phys. Rev. E 76, 021803 (2007).\\ 2. P. Rowghanian and A. Y. Grosberg, J. Phys. Chem. B 115, 14127 (2011).\\ 3. J. Sarabadani, T. Ikonen and T. Ala-Nissila, J. Chem. Phys. 141, 214907 (2014).\\ 4. J. Sarabadani, T. Ikonen and T. Ala-Nissila, J. Chem. Phys. 143, 074905 (2015).\\ 5. J. Sarabadani et al., submitted (2016).

Authors

  • Tapio Ala-Nissil\"a

    Aalto Univ, Department of Applied Physics, Aalto University School of Science