Acceleration of molecular complex dissociation by occlusion of rapid rebinding

ORAL

Abstract

Molecular complexes in biology are held together by non-covalent interactions. Explicit consideration of molecular diffusion suggests that the dissociation kinetics of these systems are not adequately explained by simple distinctions between ``bound'' and ``free'' states of its molecular components. We formulated physical models that describe the effect of competitor molecules on the dissociation of a complex. The models show that competitor acceleration of complex dissociation by occluding rapid re-association is a natural feature of a molecular competition that could play a significant role in a wide variety of biological regulatory processes. We use single-molecule fluorescence colocalization experiments on a model complex to test this prediction and show that the effect is observed in biologically relevant ranges of competitor concentration. The results also demonstrate that single-molecule colocalization experiments can accurately measure dissociation rates despite their limited spatiotemporal resolution.

Authors

  • Thayaparan Paramanathan

    Department of Biochemistry and MRSEC, Brandeis University, Waltham, MA 02454; Department of Natural Sciences, Assumption College, Worcester, MA 01609

  • Daniel Reeves

    Department of Physics, Brandeis University, Waltham, MA 02454: Rowland Institute, Harvard University Cambridge, MA 02138

  • Larry Friedman

    Department of Biochemistry, Brandeis University, Waltham, MA 02454

  • Jane Kondev

    Brandeis Univ, Department of Physics and MRSEC, Brandeis University, Waltham, MA 02454

  • Jeff Gelles

    Department of Biochemistry and MRSEC, Brandeis University, Waltham, MA 02454