Stochastic gene expression with bursting and positive feedback

ORAL

Abstract

Stochasticity (or noise) in the process of gene expression can play a critical role in cellular circuits that control switching between probabilistic cell-fate decisions in diverse organisms. Such circuits often include positive feedback loops as critical elements. In some cases (e.g. HIV-1 viral infections), switching between different cell fates occurs even in the absence of bistability in the underlying deterministic model. To characterize the role of noise in such systems, we analyze a simple gene expression circuit that includes contributions from both transcriptional and translational bursting and positive feedback effects. Using a combination of analytical approaches and stochastic simulations, we explore how the underlying parameters control the corresponding mean and variance in protein distributions.

Authors

  • Thierry Platini

    Virginia Bioinformatics Institute

  • Hodjat Pendar

    Engineering Science and Mechanics Department, Virginia Tech, Virginia Polytechnic Institute and State University, Department of Physics, Virginia Tech

  • Rahul Kulkarni

    Virginia Polytechnic Institute and State University, Department of Physics, Virginia Tech