Tailoring the metabolism against mutations
ORAL
Abstract
In the post-genomic era, organisms can be modelled at the whole-cell level in silico via steady state methods to describe their metabolic capabilities. We use two such methods, Flux Balance Analysis and Minimization of Metabolic Adjustment to explore the behavior of cells (of E. coli and S. cerevisiae) after severe mutations. We propose experimentally feasible ways of modifying the underlying biochemical reaction network of a mutant cell such that cell functionality, in particular growth rate, is significantly improved.
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Authors
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Natali Gulbahce
Northeastern University
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Adilson E. Motter
Northwestern University
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Eivind Almaas
Lawrence Livermore National Laboratory, Lawrence Livermore Natl Lab
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Albert-Laszlo Barabasi
Northeastern University, Center for Complex Network Research and Dept. of Physics, Northeastern University; Center for Cancer Systems Biology, Dana Farber Cancer Institute., Center for Network Science, Dept of Physics, Biology and Computer Science, Northeastern Univeristy