Entropically driven helix formation
ORAL
Abstract
We investigate a purely entropic approach to understanding the folding of helices that exclusively relies on a local and homogeneous interaction with depleting spheres. We found that by decreasing the size of the depleting spheres for a given volume fraction the helix formed becomes tighter. In the limit of small spheres the helix becomes the optimally tight helix of pitch to radius ratio of 2.5122 often found in alpha helices of protiens. The depletion interaction can be used as a surrogate for hydrophobicity, polymer-polymer interactions, and for boundary layers in elastica and liquid crystals.
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Authors
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Yehuda Snir
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Randall Kamien
University of Pennsylvania, Department of Physics and Astronomy, University of Pennsylvania