APS Logo

Detection of Fungal Infection via Macroscopic Fluorescence of DNA/RNA using Non-Toxic SYBR-safe Dyes for a New, Accurate, Fast, Handheld, Small Blood Volume Diagnostic (SBVD) Device: InnovaBug™ - Proof of Concept

POSTER

Abstract

The COVID-19 pandemic caused by the SARS-CoV-2 virus[1], and its secondary bacterial and fungal infections [2-5] have created an urgent need for a new, Small Biological Sampling Volume Diagnostic (SBVD) Device, which is Handheld, Low-Cost, Fast, and Reliable. This device needs to detect new rising pathogens at the triage level - before pathogen identification and specific tests can be developed and widely distributed. Pathogen load evaluation is needed to rapidly evaluate both the infection degree of severity and therapies effectiveness. State-of-the art infection diagnostics in Blood, Serum, Urine, Sputum and Spinal fluids use the universally accepted Colony Forming Units (CFUs) counting. This requires 10-30 mL of fluid and 24-72 hours of incubation, taking days for results, and yielding 30% false positives. Misdiagnosed infections leads to massive overuse of antibiotics costing US hospitals ~ $20 Billion/year, and causing 35,000+ US deaths/year from antibiotic resistant infections[10-11]. InnovaBug™ aims to detect pathogens and count pathogen loads via SYBR-safe fluorescent dyes binding to nucleic acid pairs in DNA/RNA helices. Recently, macroscopic bacterial detection was tested successfully using 0.3 mL drops of SYBR dyes on 0.3 mL calibrated pathogen solutions, via the first proof-of-concept studies to develop InnovaBug™ [6-9] . The present work uses this approach to detect fungal infections by Macroscopic Epi-Fluorescence[6-9,12] via SYBR dyes on fungal colonies for InnovaBug™.

Publication: 1. What is COVID-19? Last Upd. Jul 10, 2023 Source: National Center for Immunization and Respiratory Diseases (NCIRD), Division of Viral Diseases Content source: Centers for Disease Control and Prevention Accessed Sep. 4th, 2023<br>https://www.cdc.gov/coronavirus/2019-ncov/your-health/about-covid-19.html#:~:text=COVID%2D19%20(coronavirus%20disease%202019,very%20contagious%20and%20spreads%20quickly – (2023).<br>2. Choudhary NK, Jain AK, Soni R, Gahlot N. Mucormycosis: A deadly black fungus infection among COVID-19 patients in India. Clinical Epidemiology and Global Health. 2021 Oct-Dec;12:100900. doi: 10.1016/j.cegh.2021.100900. Epub 2021 Nov 1. PMID: 34746515; PMCID: PMC8559302. (2021).<br>3. Aspergillosis Last Rev. Dec. 27, 2022 Source: Centers for Disease Control and Prevention, National Center for Emerging and Zoonotic Infectious Diseases (NCEZID), Division of Foodborne, Waterborne, and Environmental Diseases (DFWED) Accessed Sep. 4th, 2023 https://www.cdc.gov/fungal/diseases/aspergillosis/index.html (2023).<br>4. Al-Tawfiq, J.A., Alhumaid, S., Alshukairi, A.N. et al. COVID-19 and mucormycosis superinfection: the perfect storm. Infection 49, 833–853 (2021). https://doi.org/10.1007/s15010-021-01670-1 (2021).<br>5. Marr, K. A., Platt, A., Tornheim, J. A., Zhang, S. X., Datta, K., Cardozo, C....Garcia-Vidal, C. (2021). Aspergillosis Complicating Severe Coronavirus Disease. Emerging Infectious Diseases, 27(1), 18-25. https://doi.org/10.3201/eid2701.202896.<br>6. Rane, R., Tanvi S., K. Sivakumar, V. Amin, V.j Amin, V. Swaminthan, V. Desai, …Nicolle Herbots. "Macroscopic vs Microscopic UV Fluorescence of DNA/RNA: a New Approach for Fast, Accurate Detection, Counting of Pathogens in Drops for a New Device InnovaBug™." Bull. of the American. Physical Society 66 (2021). https://meetings.aps.org/Meeting/4CS21/Session/J05.6<br>7. Amin, V., Amin, V., Rane, R., Sivakumar, K., Sathish, T., Desai, V., Culbertson, E., Culbertson, R. and Herbots, N., (2021) Quantitative Detection of Pathogen Load via a Rapid, Small Fluid Volume Diagnostic (SFVD) Device, using 0.03--0.3 mL of Fluids, vs Colony Forming Units (CFU) counting: InnovaBug™. Bulletin of the American Physical Society, 66. https://meetings.aps.org/Meeting/4CS21/Session/J05, (2021).<br>8. Rane, R., Sivakumar, K., Sathish, T., Puglisi, L., Amin, V., Amin, V., Desai, V., Culbertson, E.J., Culbertson, R.J. and Herbots, N., 2 InnovaBug--Handheld, Low-Cost, Rapid, Accurate, Small Fluid Volume Diagnostic (SFVD) Device for Pathogen Detection using Drops: Design and Proof-of-Concept. Bull. of the American Physical Society, 66. https://meetings.aps.org/Meeting/4CS21/Session/J05.2 (2021).<br>9. Handheld, Low-Cost, Rapid, Accurate, Small Fluid Volume Diagnostic (SFVD) Device for Pathogen Detection using Drops. Inventors Rane, R., Sathish, T, Amin, V Y., Amin, V Y V., Culbertson, E.J., Culbertson, R.J. Herbots, N. US Pat. Pend. (2023)<br>10. "Antimicrobial Resistance Collaborators", Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis. Lancet 2022; 399: 629–55, https://doi.org/10.1016/ S0140-6736(21)02724-0 (2022)<br>11. GBD 2019 Diseases and Injuries Collaborators. Global burden of 369 diseases and injuries in 204 countries and territories, 1990-2019: a systematic analysis for the Global Burden of Disease Study 2019. Lancet. 2020 Oct 17;396(10258):1204-1222. doi: 10.1016/S0140-6736(20)30925-9. Erratum in: Lancet. 2020 Nov 14;396(10262):1562. PMID: 33069326; PMCID: PMC7567026.<br>12. Price N. Routine Fluorescence Imaging to Detect Wound Bacteria Reduces Antibiotic Use and Antimicrobial Dressing Expenditure While Improving Healing Rates: Retrospective Analysis of 229 Foot Ulcers. Diagnostics (Basel). 2020 Nov 10;10(11):927. doi: 10.3390/diagnostics10110927. PMID: 33182630; PMCID: PMC7696457.

Presenters

  • Rishabh Sreepathy

    Infinitum BioMed/ SiO2 Innovates/ Arizona State U. Physics

Authors

  • Rishabh Sreepathy

    Infinitum BioMed/ SiO2 Innovates/ Arizona State U. Physics

  • Viraj Y Amin

    Infinitum BioMed / SiO2 Innovates LLC/ UV One Hygienics Inc., Arizona State University, Infinitum BioMed/ SiO2 Innovates LLC/ UV ONE Hygienics Inc.

  • Ashwin Suresh

    Infinitum BioMed / SiO2 Innovates LLC/ UV One Hygienics Inc., Infinitum BioMed / SiO2 Innovates LLC/ UV One Hygienics Inc./ Arizona State University Dept. of Physics

  • Aarush Thinakaran

    Infinitum BioMed/ SiO2 Innovates/ Arizona State U. Physics

  • Srivatsan J Swaminathan

    Arizona State University, Infinitum BioMed / SiO2 Innovates LLC/ UV One Hygienics Inc.

  • Riley Rane

    Infinitum BioMed / SiO2 Innovates LLC/ UV One Hygienics Inc.

  • Rianna N Rane

    Infinitum BioMed/ SiO2 Innovates LLC/ UV One Hygienics Inc.

  • Vishesh Y Amin

    Infinitum BioMed / SiO2 Innovates LLC/ UV One Hygienics Inc.

  • Nimith Gurijala

    Solar GaAs/ SiO2 Innovates/ Arizona State U. Physics, Arizona State University

  • Shreyash T Prakash

    Infinitum BioMed/ SiO2 Innovates/ Arizona State U. Physics, Infinitum BioMed LLC BP w/UV ONE Hygienics & SiO2 Innovates LLC/Solar GAAS, Arizona State University

  • Siddu Jandhyala

    Arizona State University

  • Arjun Sekar

    Arizona State University

  • Nithish Prakash

    Infinitum BioMed / SiO2 Innovates LLC/ UV One Hygienics Inc.

  • Mark I Russell-Hill

    Infinitum BioMed LLC/ UV One Hygienics Inc.

  • Dora D Suppes

    Infinitum BioMed LLC/ UV One Hygienics Inc.

  • Nicole Herbots

    Infinitum BioMed/ SiO2 Innovates/ Arizona State U. Physics