GPU-based scale-resolving simulations of the chaotic cardiovascular flows
ORAL
Abstract
Blood flow in the heart and large vessels presents a complex vortical character which involves a rich cascade of spatial and temporal scales. For instance, ejection of oxygenated blood out of the left ventricle results in a relatively high Reynolds number flow (Re=5000-10000) which is prone to a turbulence signature through interaction with the complex aortic geometry. Besides vessel curvature and subtle surface features, turbulence in the aorta may further be enhanced by a disease scenario e.g. atherosclerosis, and/or a present medical device. Scale-resolving computational fluid dynamics (CFD) simulations can be used to provide a detailed view of this turbulent flow. We present a GPU-based incompressible Navier-Stokes solver for scale-resolving simulations of blood flow in patient-specific aortic geometries. The flow solver leverages an optimised MPI-CUDA implementation and dedicated numerics, to coup with grid sizes beyond one billion. The geometric features are extracted from computed tomography (CT) angiograms and are integrated into the solver using a sharp-interface immersed boundary method. Using the present GPU-based solver, we show that intensive simulations matching O(100M) voxels which often require O(10K) CPU cores can now be performed with only O(10) P100 GPUs.
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Publication:Planned: GPU-based scale-resolving simulations of the chaotic cardiovascular flows, to be submitted, 2021.
Numerical Methodology (published): 1. A high-throughput hybrid task and data parallel Poisson solver for large-scale simulations of incompressible turbulent flows on distributed GPUs, Journal of Computational Physics, 437, 110329, 2021.
2. High-order accurate simulation of incompressible turbulent flows on many parallel GPUs of a hybrid-node supercomputer, Computer Physics Communications, 244, 132-142, 2019.
Presenters
Hadi Zolfaghari
Univ of Cambridge
Authors
Hadi Zolfaghari
Univ of Cambridge
Mervyn Andiapen
Barts Heart Centre, Barts Health NHS Trust, London, United Kingdom
Andreas Baumbach
Department of Cardiology, Barts Heart Centre, Barts Health NHS Trust, London, UK
Anthony Mathur
Department of Cardiology, Barts Heart Centre, Barts Health NHS Trust, London, UK